HMGN1 enhances CRISPR-directed dual-function A-to-G and C-to-G base editing

Nat Commun. 2023 Apr 27;14(1):2430. doi: 10.1038/s41467-023-38193-2.

Abstract

C-to-G base editors have been successfully constructed recently, but limited work has been done on concurrent C-to-G and A-to-G base editing. In addition, there is also limited data on how chromatin-associated factors affect the base editing. Here, we test a series of chromatin-associated factors, and chromosomal protein HMGN1 was found to enhance the efficiency of both C-to-G and A-to-G base editing. By fusing HMGN1, GBE and ABE to Cas9, we develop a CRISPR-based dual-function A-to-G and C-to-G base editor (GGBE) which is capable of converting simultaneous A and C to G conversion with substantial editing efficiency. Accordingly, the HMGN1 role shown in this work and the resulting GGBE tool further broaden the genome manipulation capacity of CRISPR-directed base editors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • CRISPR-Cas Systems / genetics
  • Chromatin
  • Gene Editing* / methods
  • Genome
  • HMGN1 Protein* / genetics
  • Transcription Factors / genetics

Substances

  • HMGN1 Protein
  • Chromatin
  • Transcription Factors