The boundaries and regions between individual classes in biomedical image classification are hazy and overlapping. These overlapping features make predicting the correct classification result for biomedical imaging data a difficult diagnostic task. Thus, in precise classification, it is frequently necessary to obtain all necessary information before making a decision. This paper presents a novel deep-layered design architecture based on Neuro-Fuzzy-Rough intuition to predict hemorrhages using fractured bone images and head CT scans. To deal with data uncertainty, the proposed architecture design employs a parallel pipeline with rough-fuzzy layers. In this case, the rough-fuzzy function functions as a membership function, incorporating the ability to process rough-fuzzy uncertainty information. It not only improves the deep model's overall learning process, but it also reduces feature dimensions. The proposed architecture design improves the model's learning and self-adaptation capabilities. In experiments, the proposed model performed well, with training and testing accuracies of 96.77% and 94.52%, respectively, in detecting hemorrhages using fractured head images. The comparative analysis shows that the model outperforms existing models by an average of 2.6 ±0.90% on various performance metrics.