Genetic characteristics of a novel HIV-1 recombinant lineage (CRF103_01B) and its prevalence in northern China

Virus Genes. 2023 Aug;59(4):643-650. doi: 10.1007/s11262-023-01994-0. Epub 2023 Apr 20.

Abstract

During the routine surveillance of HIV-1 pretreatment drug resistance in Beijing, five men who have sex with men (MSM) and a woman were observed to get infected by newly identified CRF103_01B strain. To elucidate the genetic characteristics, the near full-length genome (NFLG) was obtained. Phylogenetic inference indicated that CRF103_01B NFLG was composed of six mosaic segments. Segments IV and V of CRF103_01B were located among the clusters subtype B and CRF01_AE (group 5), respectively. The CRF103_01B strain was deduced to originate from Beijing MSM population around 2002.3-2006.4 and continued to spread among MSM population at a low level, then to the general population via heterosexual contact in northern China. Molecular epidemiology surveillance of CRF103_01B should be reinforced.

Keywords: CRF103_o1B; Men who have sex with men; Near full-length genome; Phylogenetic inference.

MeSH terms

  • China / epidemiology
  • Genome, Viral / genetics
  • Genotype
  • HIV Infections* / epidemiology
  • HIV Infections* / genetics
  • HIV-1* / genetics
  • Homosexuality, Male
  • Humans
  • Male
  • Phylogeny
  • Prevalence
  • Sequence Analysis, DNA
  • Sexual and Gender Minorities*