Characterization of a TetR-type positive regulator AtrA for lincomycin production in Streptomyces lincolnensis

Biosci Biotechnol Biochem. 2023 Jun 23;87(7):786-795. doi: 10.1093/bbb/zbad046.

Abstract

AtrA belongs to the TetR family and has been well characterized for its roles in antibiotic biosynthesis regulation. Here, we identified an AtrA homolog (AtrA-lin) in Streptomyces lincolnensis. Disruption of atrA-lin resulted in reduced lincomycin production, whereas the complement restored the lincomycin production level to that of the wild-type. In addition, atrA-lin disruption did not affect cell growth and morphological differentiation. Furthermore, atrA-lin disruption hindered the transcription of regulatory gene lmbU, structural genes lmbA and lmbW inside the lincomycin biosynthesis gene cluster, and 2 other regulatory genes, adpA and bldA. Completement of atrA-lin restored the transcription of these genes to varying degrees. Notably, we found that AtrA-lin directly binds to the promoter region of lmbU. Collectively, AtrA-lin positively modulated lincomycin production via both pathway-specific and global regulators. This study offers further insights into the functional diversity of AtrA homologs and the mechanism of lincomycin biosynthesis regulation.

Keywords: Streptomyces lincolnensis; AtrA; lincomycin production; regulatory pathway.

MeSH terms

  • Anti-Bacterial Agents / metabolism
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Gene Expression Regulation, Bacterial
  • Lincomycin* / metabolism
  • Lincomycin* / pharmacology
  • Streptomyces* / genetics
  • Streptomyces* / metabolism

Substances

  • Lincomycin
  • Bacterial Proteins
  • Anti-Bacterial Agents

Supplementary concepts

  • Streptomyces lincolnensis