Structural and functional properties of a plant NRAMP-related aluminum transporter

Elife. 2023 Apr 19:12:e85641. doi: 10.7554/eLife.85641.

Abstract

The transport of transition metal ions by members of the SLC11/NRAMP family constitutes a ubiquitous mechanism for the uptake of Fe2+ and Mn2+ across all kingdoms of life. Despite the strong conservation of the family, two of its branches have evolved a distinct substrate preference with one mediating Mg2+ uptake in prokaryotes and another the transport of Al3+ into plant cells. Our previous work on the SLC11 transporter from Eggerthella lenta revealed the basis for its Mg2+ selectivity (Ramanadane et al., 2022). Here, we have addressed the structural and functional properties of a putative Al3+ transporter from Setaria italica. We show that the protein transports diverse divalent metal ions and binds the trivalent ions Al3+ and Ga3+, which are both presumable substrates. Its cryo-electron microscopy (cryo-EM) structure displays an occluded conformation that is closer to an inward- than an outward-facing state, with a binding site that is remodeled to accommodate the increased charge density of its transported substrate.

Keywords: Setaria italica; aluminum toxicity; aluminum transport; cryo-electron microscopy; molecular biophysics; structural biology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aluminum* / metabolism
  • Binding Sites
  • Biological Transport
  • Cryoelectron Microscopy
  • Membrane Transport Proteins* / metabolism

Substances

  • Aluminum
  • Membrane Transport Proteins

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.