Development and validation of a deep learning survival model for cervical adenocarcinoma patients

BMC Bioinformatics. 2023 Apr 13;24(1):146. doi: 10.1186/s12859-023-05239-7.

Abstract

Background: The aim was to develop a personalized survival prediction deep learning model for cervical adenocarcinoma patients and process personalized survival prediction.

Methods: A total of 2501 cervical adenocarcinoma patients from the surveillance, epidemiology and end results database and 220 patients from Qilu hospital were enrolled in this study. We created our deep learning (DL) model to manipulate the data and evaluated its performance against four other competitive models. We tried to demonstrate a new grouping system oriented by survival outcomes and process personalized survival prediction by using our DL model.

Results: The DL model reached 0.878 c-index and 0.09 Brier score in the test set, which was better than the other four models. In the external test set, our model achieved a 0.80 c-index and 0.13 Brier score. Thus, we developed prognosis-oriented risk grouping for patients according to risk scores computed by our DL model. Notable differences among groupings were observed. In addition, a personalized survival prediction system based on our risk-scoring grouping was developed.

Conclusions: We developed a deep neural network model for cervical adenocarcinoma patients. The performance of this model proved to be superior to other models. The results of external validation supported the possibility that the model can be used in clinical work. Finally, our survival grouping and personalized prediction system provided more accurate prognostic information for patients than traditional FIGO stages.

Keywords: Adenocarcinoma of cervix; Deep learning; SEER database; Survival prediction.

MeSH terms

  • Adenocarcinoma*
  • Deep Learning*
  • Female
  • Humans
  • Neural Networks, Computer
  • Uterine Cervical Neoplasms* / pathology

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