Sputum pathogen spectrum and clinical outcomes of upper respiratory tract infection in bronchiectasis exacerbation: a prospective cohort study

Emerg Microbes Infect. 2023 Dec;12(1):2202277. doi: 10.1080/22221751.2023.2202277.

Abstract

Upper respiratory tract infection (URTI) is common in humans. We sought to profile sputum pathogen spectrum and impact of URTI on acute exacerbation of bronchiectasis (AE). Between March 2017 and December 2021, we prospectively collected sputum from adults with bronchiectasis. We stratified AEs into events related (URTI-AE) and unrelated to URTI (non-URTI-AE). We captured URTI without onset of AE (URTI-non-AE). We did bacterial culture and viral detection with polymerase chain reaction, and explored the pathogen spectrum and clinical impacts of URTI-AE via longitudinal follow-up. Finally, we collected 479 non-AE samples (113 collected at URTI-non-AE and 225 collected at clinically stable) and 170 AE samples (89 collected at URTI-AE and 81 collect at non-URTI-AE). The viral detection rate was significantly higher in URTI-AE (46.1%) than in non-URTI-AE (4.9%) and URTI-non-AE (11.5%) (both P < 0.01). Rhinovirus [odds ratio (OR): 5.00, 95% confidence interval (95%CI): 1.06-23.56, P = 0.03] detection was independently associated with URTI-AE compared with non-URTI-AE. URTI-AE tended to yield higher viral load and detection rate of rhinovirus, metapneumovirus and bacterial shifting compared with URTI-non-AE. URTI-AE was associated with higher initial viral loads (esp. rhinovirus, metapneumovirus), greater symptom burden (higher scores of three validated questionnaires) and prolonged recovery compared to those without. Having experienced URTI-AE predicted a greater risk of future URTI-AE (OR: 10.90, 95%CI: 3.60-33.05). In summary, URTI is associated with a distinct pathogen spectrum and aggravates bronchiectasis exacerbation, providing the scientific rationale for the prevention of URTI to hinder bronchiectasis progression.

Keywords: Upper respiratory tract infections; bronchiectasis; exacerbation; symptom burden; virus.

MeSH terms

  • Adult
  • Bronchiectasis* / complications
  • Bronchiectasis* / microbiology
  • Humans
  • Prospective Studies
  • Respiratory Tract Infections*
  • Rhinovirus / genetics
  • Sputum / microbiology

Grants and funding

This article was supported by National Science Foundation – Outstanding Youth Fund [grant number 82222001], National Natural Science Foundation of China [grant number 81870003], Guangdong Science and Technology Foundation Natural Science Foundation [grant number 2019A1515011634], Zhongnanshan Medical Foundation of Guangdong Province (grant number ZNSA-2020013), Guangzhou Science and Technology Plans (grant number 2023B03J0407 and 202102010372), Plan on Enhancing Scientific Research in Guangzhou Medical University (grant number not applicable) (to Prof. Guan), and Guangzhou Science and Technology Plans (grant number 202201020517, to Dr. Zhang).