Monkeypox detection from skin lesion images using an amalgamation of CNN models aided with Beta function-based normalization scheme

PLoS One. 2023 Apr 7;18(4):e0281815. doi: 10.1371/journal.pone.0281815. eCollection 2023.

Abstract

We have recently been witnessing that our society is starting to heal from the impacts of COVID-19. The economic, social and cultural impacts of a pandemic cannot be ignored and we should be properly equipped to deal with similar situations in future. Recently, Monkeypox has been concerning the international health community with its lethal impacts for a probable pandemic. In such situations, having appropriate protocols and methodologies to deal with the outbreak efficiently is of paramount interest to the world. Early diagnosis and treatment stand as the only viable option to tackle such problems. To this end, in this paper, we propose an ensemble learning-based framework to detect the presence of the Monkeypox virus from skin lesion images. We first consider three pre-trained base learners, namely Inception V3, Xception and DenseNet169 to fine-tune on a target Monkeypox dataset. Further, we extract probabilities from these deep models to feed into the ensemble framework. To combine the outcomes, we propose a Beta function-based normalization scheme of probabilities to learn an efficient aggregation of complementary information obtained from the base learners followed by the sum rule-based ensemble. The framework is extensively evaluated on a publicly available Monkeypox skin lesion dataset using a five-fold cross-validation setup to evaluate its effectiveness. The model achieves an average of 93.39%, 88.91%, 96.78% and 92.35% accuracy, precision, recall and F1 scores, respectively. The supporting source codes are presented in https://github.com/BihanBanerjee/MonkeyPox.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Disease Outbreaks
  • Humans
  • Hydrolases
  • Monkeypox virus
  • Mpox (monkeypox)* / diagnostic imaging
  • Skin Diseases*

Substances

  • Hydrolases

Grants and funding

The work of George Efimenko was supported by the Ministry of Science and Higher Education of the Russian Federation "Goszadanie" No 075-01024-21-02 from 29.09.2021 (Project No. FSEE-2021-0015).