Genome-Wide Associations and Confirmatory Meta-Analyses in Diabetic Retinopathy

Genes (Basel). 2023 Mar 5;14(3):653. doi: 10.3390/genes14030653.

Abstract

The present study aimed to summarize and validate the genomic association signals for diabetic retinopathy (DR), proliferative DR, and diabetic macular edema/diabetic maculopathy. A systematic search of the genome-wide association study (GWAS) catalog and PubMed/MELINE databases was conducted to curate a comprehensive list of significant GWAS discoveries. The top signals were then subjected to meta-analysis using established protocols. The results indicate the need for improved consensus among DR GWASs, highlighting the importance of validation efforts. A subsequent meta-analysis confirmed the association of two SNPs, rs4462262 (ZWINT-MRPS35P3) (odds ratio = 1.38, p = 0.001) and rs7903146 (TCF7L2) (odd ratio = 1.30, p < 0.001), with DR in independent populations, strengthening the evidence of their true association. We also compiled a list of candidate SNPs for further validation. This study highlights the importance of consistent validation and replication efforts in the field of DR genetics. The two identified gene loci warrant further functional investigation to understand their role in DR pathogenesis.

Keywords: diabetes mellitus; diabetic retinopathy; diabetic vasculopathy; functional annotation; genetic associations; genome-wide association study; meta-analysis; systematic review.

Publication types

  • Meta-Analysis

MeSH terms

  • Diabetes Mellitus*
  • Diabetic Retinopathy* / genetics
  • Genome-Wide Association Study / methods
  • Humans
  • Macular Edema* / complications
  • Macular Edema* / genetics
  • Odds Ratio
  • Polymorphism, Single Nucleotide

Grants and funding

This research received no external funding.