The cyclic peptide G4CP2 enables the modulation of galactose metabolism in yeast by interfering with GAL4 transcriptional activity

Front Mol Biosci. 2023 Mar 1:10:1017757. doi: 10.3389/fmolb.2023.1017757. eCollection 2023.

Abstract

Genetically-encoded combinatorial peptide libraries are convenient tools to identify peptides to be used as therapeutics, antimicrobials and functional synthetic biology modules. Here, we report the identification and characterization of a cyclic peptide, G4CP2, that interferes with the GAL4 protein, a transcription factor responsible for the activation of galactose catabolism in yeast and widely exploited in molecular biology. G4CP2 was identified by screening CYCLIC, a Yeast Two-Hybrid-based combinatorial library of cyclic peptides developed in our laboratory. G4CP2 interferes with GAL4-mediated activation of galactose metabolic enzymes both when expressed intracellularly, as a recombinant peptide, and when provided exogenously, as a chemically-synthesized cyclic peptide. Our results support the application of G4CP2 in microbial biotechnology and, additionally, demonstrate that CYCLIC can be used as a tool for the rapid identification of peptides, virtually without any limitations with respect to the target protein. The possible biotechnological applications of cyclic peptides are also discussed.

Keywords: GAL4; combinatorial library; cyclic peptide; drug discovery; galactose metabolism; protein interference; yeast two-hybrid.

Grants and funding

This project received funding from the EU Horizon 2020-EU.1.2 Future and Emerging Technologies (FET) open research and innovation action under grant agreement 828,940 to PP, from MIUR (Ministero dell'Università e della Ricerca)–PRIN (Progetti di Ricerca di Rilevante Interesse Nazionale) 2017 (protocol 20173LBZM2_005) to SM, from Regione Lombardia PROGETTI DI RICERCA IN CAMPO AGRICOLO E FORESTALE (NoBlack) to SM, from Cariplo Foundation (Wake-apt) to SM and from Grandi Sfide di Ateneo (GSA) to PP, SM, and SPe. The authors acknowledge the support of the APC central fund of the University of Milan.