Identification and validation of eight estrogen-related genes for predicting prognosis of papillary thyroid cancer

Aging (Albany NY). 2023 Mar 13;15(5):1668-1684. doi: 10.18632/aging.204582. Epub 2023 Mar 13.

Abstract

Papillary thyroid cancer (PTC) is one of the most common malignant tumors in female, and estrogen can affect its progression. However, the targets and mechanisms of estrogen action in PTC remain unclear. Therefore, this study focuses on the relationship between estrogen-related genes (ERGs) expression and prognosis in PTC, particularly neuropeptide U (NMU), and its important role in tumor progression. Based on The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases, differentially expressed genes (DEGs) predominantly enriched in ERGs were identified between PTC and normal tissue. Then, we identified ERGs that contributed most to PTC prognosis, including Transducer of ERBB2 1 (TOB1), trefoil factor 1 (TFF1), phospholipase A and acyltransferase 3 (PLAAT3), NMU, kinesin family member 20A (KIF20A), DNA topoisomerase II alpha (TOP2A), tetraspanin 13 (TSPAN13), and carboxypeptidase E (CPE). In addition, we confirmed that NMU was highly expressed in PTC and explored the effect of NMU on PTC cells proliferation in vitro and in vivo. The results showed that the proliferative capacity of PTC cells was significantly reduced with NMU knockdown. Moreover, the phosphorylation levels of the Kirsten rat sarcoma virus (KRAS) signaling pathway were significantly lower with NMU knockdown. These results suggest that ERGs, especially NMU, may be novel prognostic indicators in PTC.

Keywords: NMU; biomarkers; estrogen-related genes; papillary thyroid cancer; prognosis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Female
  • Gene Expression Regulation, Neoplastic
  • Humans
  • Prognosis
  • Signal Transduction
  • Tetraspanins / genetics
  • Tetraspanins / metabolism
  • Thyroid Cancer, Papillary / pathology
  • Thyroid Neoplasms* / pathology

Substances

  • TSPAN13 protein, human
  • Tetraspanins