Signal Amplification in Electrochemical DNA Biosensors Using Target-Capturing DNA Origami Tiles

ACS Sens. 2023 Apr 28;8(4):1471-1480. doi: 10.1021/acssensors.2c02469. Epub 2023 Mar 13.

Abstract

Electrochemical DNA (e-DNA) biosensors are feasible tools for disease monitoring, with their ability to translate hybridization events between a desired nucleic acid target and a functionalized transducer, into recordable electrical signals. Such an approach provides a powerful method of sample analysis, with a strong potential to generate a rapid time to result in response to low analyte concentrations. Here, we report a strategy for the amplification of electrochemical signals associated with DNA hybridization, by harnessing the programmability of the DNA origami method to construct a sandwich assay to boost charge transfer resistance (RCT) associated with target detection. This allowed for an improvement in the sensor limit of detection by two orders of magnitude compared to a conventional label-free e-DNA biosensor design and linearity for target concentrations between 10 pM and 1 nM without the requirement for probe labeling or enzymatic support. Additionally, this sensor design proved capable of achieving a high degree of strand selectivity in a challenging DNA-rich environment. This approach serves as a practical method for addressing strict sensitivity requirements necessary for a low-cost point-of-care device.

Keywords: DNA hybridization; DNA nanotechnology; antimicrobial resistance gene; electrochemical impedance spectroscopy; point-of-care devices; sensitivity enhancement; target selectivity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biosensing Techniques* / methods
  • DNA / genetics
  • Electrochemical Techniques* / methods
  • Nucleic Acid Hybridization / methods

Substances

  • DNA