A tyrosine, histidine-selective bifunctional cross-linker for protein structure analysis

Talanta. 2023 Jun 1:258:124421. doi: 10.1016/j.talanta.2023.124421. Epub 2023 Mar 10.

Abstract

Chemical cross-linking mass spectrometry (XL-MS) significantly contributes to the analysis of protein structures and the elucidation of protein-protein interactions. Currently available cross-linkers mainly target N-terminus, lysine, glutamate, aspartate, and cysteine residues in protein. Herein, a bifunctional cross-linker, named [4,4'-(disulfanediylbis(ethane-2,1-diyl)) bis(1-methyl-1,2,4-triazolidine-3,5-dione)] (DBMT) has been designed and characterized aiming to extremely expand the application of XL-MS approach. DBMT is capable of selectively targeting tyrosine residue in protein via an electrochemical click reaction, and/or targeting histidine residue in protein in the presence of 1O2 generated under photocatalytic reaction. A novel cross-linking strategy based on this cross-linker has been developed and demonstrated using model proteins, which provides a complementary XL-MS tool analyzing protein structure, protein complexes, protein-protein interactions, and even protein dynamics.

Keywords: Cross-linking mass spectrometry; Electrochemical click reaction; Histidine residue reactive; Photocatalysis; Tyrosine residue reactive.

MeSH terms

  • Cross-Linking Reagents / chemistry
  • Histidine*
  • Lysine
  • Mass Spectrometry / methods
  • Proteins / chemistry
  • Tyrosine*

Substances

  • Tyrosine
  • Histidine
  • Proteins
  • Lysine
  • Cross-Linking Reagents