The Lichen Flavin-Dependent Halogenase, DnHal: Identification, Heterologous Expression and Functional Characterization

Appl Biochem Biotechnol. 2023 Nov;195(11):6708-6736. doi: 10.1007/s12010-022-04304-w. Epub 2023 Mar 13.

Abstract

Enzymatic halogenation captures scientific interest considering its feasibility in modifying compounds for chemical diversity. Currently, majority of flavin-dependent halogenases (F-Hals) were reported from bacterial origin, and as far as we know, none from lichenized fungi. Fungi are well-known producers of halogenated compounds, so using available transcriptomic dataset of Dirinaria sp., we mined for putative gene encoding for F-Hal. Phylogenetic-based classification of the F-Hal family suggested a non-tryptophan F-Hals, similar to other fungal F-Hals, which mainly act on aromatic compounds. However, after the putative halogenase gene from Dirinaria sp., dnhal was codon-optimized, cloned, and expressed in Pichia pastoris, the ~63 kDa purified enzyme showed biocatalytic activity towards tryptophan and an aromatic compound methyl haematommate, which gave the tell-tale isotopic pattern of a chlorinated product at m/z 239.0565 and 241.0552; and m/z 243.0074 and 245.0025, respectively. This study is the start of understanding the complexities of lichenized fungal F-hals and its ability to halogenate tryptophan and other aromatic. compounds which can be used as green alternatives for biocatalysis of halogenated compounds.

Keywords: Biocatalysis; Chlorination; Halogenating enzymes; Lichen; Phenolic compounds; Recombinant proteins.

MeSH terms

  • Flavins / genetics
  • Flavins / metabolism
  • Halogenation
  • Lichens* / metabolism
  • Organic Chemicals
  • Oxidoreductases* / metabolism
  • Phylogeny
  • Tryptophan / metabolism

Substances

  • Oxidoreductases
  • Tryptophan
  • Organic Chemicals
  • Flavins