Predicting effectiveness of anti-VEGF injection through self-supervised learning in OCT images

Math Biosci Eng. 2023 Jan;20(2):2439-2458. doi: 10.3934/mbe.2023114. Epub 2022 Nov 21.

Abstract

Anti-vascular endothelial growth factor (Anti-VEGF) therapy has become a standard way for choroidal neovascularization (CNV) and cystoid macular edema (CME) treatment. However, anti-VEGF injection is a long-term therapy with expensive cost and may be not effective for some patients. Therefore, predicting the effectiveness of anti-VEGF injection before the therapy is necessary. In this study, a new optical coherence tomography (OCT) images based self-supervised learning (OCT-SSL) model for predicting the effectiveness of anti-VEGF injection is developed. In OCT-SSL, we pre-train a deep encoder-decoder network through self-supervised learning to learn the general features using a public OCT image dataset. Then, model fine-tuning is performed on our own OCT dataset to learn the discriminative features to predict the effectiveness of anti-VEGF. Finally, classifier trained by the features from fine-tuned encoder as a feature extractor is built to predict the response. Experimental results on our private OCT dataset demonstrated that the proposed OCT-SSL can achieve an average accuracy, area under the curve (AUC), sensitivity and specificity of 0.93, 0.98, 0.94 and 0.91, respectively. Meanwhile, it is found that not only the lesion region but also the normal region in OCT image is related to the effectiveness of anti-VEGF.

Keywords: anti-VEGF; choroidal neovascularization; cystoid macular edema; effectiveness prediction; optical coherence tomography; self-supervised learning.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Choroidal Neovascularization* / metabolism
  • Choroidal Neovascularization* / pathology
  • Humans
  • Sensitivity and Specificity
  • Supervised Machine Learning
  • Tomography, Optical Coherence / methods
  • Vascular Endothelial Growth Factor A*

Substances

  • Vascular Endothelial Growth Factor A
  • VEGFA protein, human