Assessing the prospect of XAFS experiments of metalloproteins under in vivo conditions at Indus-2 synchrotron facility, India

J Synchrotron Radiat. 2023 Mar 1;30(Pt 2):449-456. doi: 10.1107/S1600577522011791. Epub 2023 Jan 13.

Abstract

The feasibility of X-ray absorption fine-structure (XAFS) experiments of ultra-dilute metalloproteins under in vivo conditions (T = 300 K, pH = 7) at the BL-9 bending-magnet beamline (Indus-2) is reported, using as an example analogous synthetic Zn (0.1 mM) M1dr solution. The (Zn K-edge) XAFS of M1dr solution was measured with a four-element silicon drift detector. The first-shell fit was tested and found to be robust against statistical noise, generating reliable nearest-neighbor bond results. The results are found to be invariant between physiological and non-physiological conditions, which confirms the robust coordination chemistry of Zn with important biological implications. The scope of improving spectral quality for accommodation of higher-shell analysis is addressed.

Keywords: XAFS; metalloproteins.

MeSH terms

  • India
  • Metalloproteins* / chemistry
  • Radiography
  • Synchrotrons*
  • X-Rays

Substances

  • Metalloproteins