Bayes Factors for Mixed Models: Perspective on Responses

Comput Brain Behav. 2023;6(1):127-139. doi: 10.1007/s42113-022-00158-x. Epub 2023 Feb 14.

Abstract

In van Doorn et al. (2021), we outlined a series of open questions concerning Bayes factors for mixed effects model comparison, with an emphasis on the impact of aggregation, the effect of measurement error, the choice of prior distributions, and the detection of interactions. Seven expert commentaries (partially) addressed these initial questions. Surprisingly perhaps, the experts disagreed (often strongly) on what is best practice-a testament to the intricacy of conducting a mixed effect model comparison. Here, we provide our perspective on these comments and highlight topics that warrant further discussion. In general, we agree with many of the commentaries that in order to take full advantage of Bayesian mixed model comparison, it is important to be aware of the specific assumptions that underlie the to-be-compared models.

Keywords: Bayes factors; Mixed effects; Mixed models; Random effects.