Stem-Loop Structures in Iron-Regulated mRNAs of Giardia duodenalis

Int J Environ Res Public Health. 2023 Feb 17;20(4):3556. doi: 10.3390/ijerph20043556.

Abstract

Giardia duodenalis is a significant cause of waterborne and foodborne infections, day-care center outbreaks, and traveler's diarrhea worldwide. In protozoa such as Trichomonas vaginalis and Entamoeba histolytica, iron affects the growth, pathogenicity mechanisms, and expression of virulence genes. One of the proposed iron regulatory mechanisms is at the post-transcriptional level through an IRE/IRP-like (iron responsive element/iron regulatory protein) system. Recently, the expression of many putative giardial virulence factors in the free-iron levels has been reported in subsequent RNAseq experiments; however, the iron regulatory mechanism remains unknown. Thus, this work aimed to determine the effects of iron on the growth, gene expression, and presence of IRE-like structures in G. duodenalis. First, the parasite's growth kinetics at different iron concentrations were studied, and the cell viability was determined. It was observed that the parasite can adapt to an iron range from 7.7 to 500 µM; however, in conditions without iron, it is unable to survive in the culture medium. Additionally, the iron modulation of three genes was determined by RT-PCR assays. The results suggested that Actin, glucosamine-6-phosphate deaminase, and cytochrome b5 mRNA were down-regulated by iron. To investigate the presence of IRE-like structures, in silico analyses were performed for different mRNAs from the Giardia genome database. The Zuker mfold v2.4 web server and theoretical analysis were used to predict the secondary structures of the 91 mRNAs analyzed. Interestingly, the iron-induced downregulation of the genes analyzed corresponds to the location of the stem-loop structures found in their UTR regions. In conclusion, iron modulates the growth and expression of specific genes, likely due to the presence of IRE-like structures in G. duodenalis mRNAs.

Keywords: Giardia duodenalis; IREs; anemia comorbidities; foodborne disease; giardiasis etiology; iron regulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Diarrhea
  • Giardia
  • Giardia lamblia*
  • Humans
  • Iron* / metabolism
  • RNA, Messenger
  • Travel

Substances

  • Iron
  • RNA, Messenger

Grants and funding

This research was funded by Grants 51241 and 152772 (to C.L.-S.) from the National Council of Science and Technology, Mexico (CONACYT) and SEP-CONACYT, Ciencia de Frontera 2019. It was also supported by the Promotion and Support Program for Research Projects (PROFAPI) of the University Autonomous of Sinaloa (to C.L.-S.). L.Y.P.-G. was a scholarship recipient from CONACYT, Mexico.