Suppression of cGAS- and RIG-I-mediated innate immune signaling by Epstein-Barr virus deubiquitinase BPLF1

PLoS Pathog. 2023 Feb 21;19(2):e1011186. doi: 10.1371/journal.ppat.1011186. eCollection 2023 Feb.

Abstract

Epstein-Barr virus (EBV) has developed effective strategies to evade host innate immune responses. Here we reported on mitigation of type I interferon (IFN) production by EBV deubiquitinase (DUB) BPLF1 through cGAS-STING and RIG-I-MAVS pathways. The two naturally occurring forms of BPLF1 exerted potent suppressive effect on cGAS-STING-, RIG-I- and TBK1-induced IFN production. The observed suppression was reversed when DUB domain of BPLF1 was rendered catalytically inactive. The DUB activity of BPLF1 also facilitated EBV infection by counteracting cGAS-STING- and TBK1-mediated antiviral defense. BPLF1 associated with STING to act as an effective DUB targeting its K63-, K48- and K27-linked ubiquitin moieties. BPLF1 also catalyzed removal of K63- and K48-linked ubiquitin chains on TBK1 kinase. The DUB activity of BPLF1 was required for its suppression of TBK1-induced IRF3 dimerization. Importantly, in cells stably carrying EBV genome that encodes a catalytically inactive BPLF1, the virus failed to suppress type I IFN production upon activation of cGAS and STING. This study demonstrated IFN antagonism of BPLF1 mediated through DUB-dependent deubiquitination of STING and TBK1 leading to suppression of cGAS-STING and RIG-I-MAVS signaling.

MeSH terms

  • DEAD Box Protein 58
  • Deubiquitinating Enzymes
  • Epstein-Barr Virus Infections* / metabolism
  • Herpesvirus 4, Human* / metabolism
  • Humans
  • Immunity, Innate
  • Nucleotidyltransferases / metabolism
  • Ubiquitin

Substances

  • DEAD Box Protein 58
  • Deubiquitinating Enzymes
  • Nucleotidyltransferases
  • Ubiquitin

Grants and funding

This study was supported by grant 18170942 to D.-Y.J. from Hong Kong Health and Medical Research Fund and grant 17127019 to D.-Y. J. from Hong Kong Research Grants Council. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.