Murburn posttranslational modifications of proteins: Cellular redox processes and murzyme-mediated metabolo-proteomics

J Cell Physiol. 2024 Mar;239(3):e30954. doi: 10.1002/jcp.30954. Epub 2023 Jan 30.

Abstract

Murburn concept constitutes the thesis that diffusible reactive species or DRS are obligatorily involved in routine metabolic and physiological activities. Murzymes are defined as biomolecules/proteins that generate/modulate/sustain/utilize DRS. Murburn posttranslational modifications (PTMs) result because murburn/murzyme functionalism is integral to cellular existence. Cells must incorporate the inherently stochastic nature of operations mediated by DRS. Due to the earlier/inertial stigmatic perception that DRS are mere agents of chaos, several such outcomes were either understood as deterministic modulations sponsored by house-keeping enzymes or deemed as unregulated nonenzymatic events resulting out of "oxidative stress". In the current review, I dispel the myths around DRS-functions, and undertake systematic parsing and analyses of murburn modifications of proteins. Although it is impossible to demarcate all PTMs into the classical or murburn modalities, telltale signs of the latter are evident from the relative inaccessibility of the locus, non-specificities and mechanistic details. It is pointed out that while many murburn PTMs may be harmless, some others could have deleterious or beneficial physiological implications. Some details of reversible/irreversible modifications of amino acid residues and cofactors that may be subjected to phosphorylation, halogenation, glycosylation, alkylation/acetylation, hydroxylation/oxidation, etc. are listed, along with citations of select proteins where such modifications have been reported. The contexts of these modifications and their significance in (patho)physiology/aging and therapy are also presented. With more balanced explorations and statistically verified data, a definitive understanding of normal versus pathological contexts of murburn modifications would be obtainable in the future.

Keywords: deterministic processes; murburn concept; murzone; murzyme; posttranslational/protein modification; stochastic processes.

Publication types

  • Review

MeSH terms

  • Humans
  • Metabolomics
  • Oxidation-Reduction
  • Phosphorylation
  • Protein Processing, Post-Translational*
  • Proteins* / metabolism
  • Proteomics / methods

Substances

  • Proteins