Reversible switching between two common protein folds in a designed system using only temperature

Proc Natl Acad Sci U S A. 2023 Jan 24;120(4):e2215418120. doi: 10.1073/pnas.2215418120. Epub 2023 Jan 20.

Abstract

Naturally occurring metamorphic proteins have the ability to interconvert from one folded state to another through either a limited set of mutations or by way of a change in the local environment. Here, we show in a designed system that it is possible to switch reversibly between two of the most common monomeric folds employing only temperature changes. We demonstrate that a latent 3α state can be unmasked from an α/β-plait topology with a single V90T amino acid substitution, populating both forms simultaneously. The equilibrium between these two states exhibits temperature dependence, such that the 3α state is predominant (>90%) at 5 °C, while the α/β-plait fold is the major species (>90%) at 30 °C. We describe the structure and dynamics of these topologies, how mutational changes affect the temperature dependence, and the energetics and kinetics of interconversion. Additionally, we demonstrate how ligand-binding function can be tightly regulated by large amplitude changes in protein structure over a relatively narrow temperature range that is relevant to biology. The 3α/αβ switch thus represents a potentially useful approach for designing proteins that alter their fold topologies in response to environmental triggers. It may also serve as a model for computational studies of temperature-dependent protein stability and fold switching.

Keywords: NMR; metamorphic proteins; protein design; protein fold switching; protein structure and dynamics.

MeSH terms

  • Amino Acid Substitution
  • Mutation
  • Protein Folding*
  • Proteins* / chemistry
  • Temperature

Substances

  • Proteins