Pathogen-associated gene discovery workflows for novel antivirulence therapeutic development

EBioMedicine. 2023 Feb:88:104429. doi: 10.1016/j.ebiom.2022.104429. Epub 2023 Jan 9.

Abstract

Novel therapeutics to manage bacterial infections are urgently needed as the impact and prevalence of antimicrobial resistance (AMR) grows. Antivirulence therapeutics are an alternative approach to antibiotics that aim to attenuate virulence rather than target bacterial essential functions, while minimizing microbiota perturbation and the risk of AMR development. Beyond known virulence factors, pathogen-associated genes (PAGs; genes found only in pathogens to date) may play an important role in virulence or host association. Many identified PAGs encode uncharacterized hypothetical proteins and represent an untapped wealth of novel drug targets. Here, we review current advances in antivirulence drug research and development, including PAG identification, and provide a comprehensive workflow from the discovery of antivirulence drug targets to drug discovery. We highlight the importance of integrating bioinformatic/genomic-based methods for novel virulence factor discovery, coupled with experimental characterization, into existing drug screening platforms to develop novel and effective antivirulence drugs.

Keywords: Antimicrobial resistance; Antivirulence drug; Bacterial pathogens; Infectious disease; Microbial genomics; Novel therapeutics.

Publication types

  • Review

MeSH terms

  • Anti-Bacterial Agents* / pharmacology
  • Anti-Bacterial Agents* / therapeutic use
  • Genetic Association Studies
  • Humans
  • Virulence / genetics
  • Virulence Factors* / genetics
  • Workflow

Substances

  • Anti-Bacterial Agents
  • Virulence Factors