Identification and Mapping of QTLs for Sulfur-Containing Amino Acids in Soybean (Glycine max L.)

J Agric Food Chem. 2023 Jan 11;71(1):398-410. doi: 10.1021/acs.jafc.2c05896. Epub 2022 Dec 27.

Abstract

Soybean is a major source of high-quality protein for humans and animals. The content of sulfur-containing amino acids (SAA) in soybean is insufficient, which has become the main factor limiting soybean nutrition. In this study, we used the high-density genetic maps derived from Guizao 1 and Brazil 13 to evaluate the quantitative trait loci of cysteine (Cys), methionine (Met), SAA, glycinin (7S), β-conglycinin (11S), ratio of glycinin to β-conglycinin (RGC), and protein content (PC). In genetic map linkage analysis, the major and stable 44 QTLs were detected, which shared nine bin intervals. Among them, the bin interval (bin157-bin160) on chromosome 5 was detected in multiple environments as a stable QTL, which was linked to 11S, 7S, RGC, and SSA. Based on the analysis of bioinformatics and RNA-sequencing data, 16 differentially expressed genes (DEGs) within these QTLs were selected as candidate genes. These results will help to elucidate the genetic mechanism of soybean SAA-related traits and provide the basis for the gene mining of sulfur-containing amino acids.

Keywords: QTL; protein; soybean; sulfur-containing amino acids.

MeSH terms

  • Amino Acids / metabolism
  • Chromosome Mapping / methods
  • Glycine max* / genetics
  • Glycine max* / metabolism
  • Humans
  • Phenotype
  • Quantitative Trait Loci*
  • Seeds / chemistry
  • Sulfur / metabolism

Substances

  • Amino Acids
  • Sulfur