In Vitro Assessment on Designing Novel Antibiofilms of Pseudomonas aeruginosa Using a Computational Approach

Molecules. 2022 Dec 15;27(24):8935. doi: 10.3390/molecules27248935.

Abstract

An anti-biofilm that can inhibit the matrix of biofilm formation is necessary to prevent recurrent and chronic Pseudomonas aeruginosa infection. This study aimed to design compounds with a new mechanism through competitive inhibitory activity against phosphomannomutase/phosphoglucomutase (PMM/PGM), using in vitro assessment and a computational (in silico) approach. The active site of PMM/PGM was assessed through molecular redocking using L-tartaric acid as the native ligand and other small molecules, such as glucaric acid, D-sorbitol, and ascorbic acid. The docking program set the small molecules to the active site, showing a stable complex formation. Analysis of structural similarity, bioavailability, absorption, distribution, metabolism, excretion, and toxicity properties proved the potential application of ligands as an anti-biofilm. In vitro assessment with crystal violet showed that the ligands could reach up to 95.87% inhibition at different concentrations. The nitrocellulose membrane and scanning electron microscopic visualization showed that the untreated P. aeruginosa biofilm was denser than the ligand-treated biofilm.

Keywords: In Vitro; P. aeruginosa; PMM/PGM; antibiofilm; computational approach.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Biofilms
  • Catalytic Domain
  • Ligands
  • Phosphoglucomutase* / chemistry
  • Phosphoglucomutase* / metabolism
  • Pseudomonas aeruginosa* / metabolism

Substances

  • Ligands
  • Phosphoglucomutase
  • Anti-Bacterial Agents