Elusive Trans-Acting Factors Which Operate with Type I (Poliovirus-like) IRES Elements

Int J Mol Sci. 2022 Dec 7;23(24):15497. doi: 10.3390/ijms232415497.

Abstract

The phenomenon of internal initiation of translation was discovered in 1988 on poliovirus mRNA. The prototypic cis-acting element in the 5' untranslated region (5'UTR) of poliovirus mRNA, which is able to direct initiation at an internal start codon without the involvement of a cap structure, has been called an IRES (Internal Ribosome Entry Site or Segment). Despite its early discovery, poliovirus and other related IRES elements of type I are poorly characterized, and it is not yet clear which host proteins (a.k.a. IRES trans-acting factors, ITAFs) are required for their full activity in vivo. Here we discuss recent and old results devoted to type I IRESes and provide evidence that Poly(rC) binding protein 2 (PCBP2), Glycyl-tRNA synthetase (GARS), and Cold Shock Domain Containing E1 (CSDE1, also known as UNR) are major regulators of type I IRES activity.

Keywords: CSDE1; GARS; IRES; ITAF; PCBP2; STRAP; UNR; poliovirus; translation initiation.

Publication types

  • Review

MeSH terms

  • 5' Untranslated Regions
  • Codon, Initiator / metabolism
  • Internal Ribosome Entry Sites / genetics
  • Poliovirus* / genetics
  • Poliovirus* / metabolism
  • Protein Biosynthesis
  • RNA, Messenger / metabolism
  • RNA, Viral / metabolism
  • Regulatory Sequences, Nucleic Acid
  • Trans-Activators / metabolism

Substances

  • Internal Ribosome Entry Sites
  • Trans-Activators
  • Codon, Initiator
  • RNA, Messenger
  • 5' Untranslated Regions
  • RNA, Viral