VANet: a medical image fusion model based on attention mechanism to assist disease diagnosis

BMC Bioinformatics. 2022 Dec 19;23(1):548. doi: 10.1186/s12859-022-05072-4.

Abstract

Background: Today's biomedical imaging technology has been able to present the morphological structure or functional metabolic information of organisms at different scale levels, such as organ, tissue, cell, molecule and gene. However, different imaging modes have different application scope, advantages and disadvantages. In order to improve the role of medical image in disease diagnosis, the fusion of biomedical image information at different imaging modes and scales has become an important research direction in medical image. Traditional medical image fusion methods are all designed to measure the activity level and fusion rules. They are lack of mining the context features of different modes of image, which leads to the obstruction of improving the quality of fused images.

Method: In this paper, an attention-multiscale network medical image fusion model based on contextual features is proposed. The model selects five backbone modules in the VGG-16 network to build encoders to obtain the contextual features of medical images. It builds the attention mechanism branch to complete the fusion of global contextual features and designs the residual multiscale detail processing branch to complete the fusion of local contextual features. Finally, it completes the cascade reconstruction of features by the decoder to obtain the fused image.

Results: Ten sets of images related to five diseases are selected from the AANLIB database to validate the VANet model. Structural images are derived from MR images with high resolution and functional images are derived from SPECT and PET images that are good at describing organ blood flow levels and tissue metabolism. Fusion experiments are performed on twelve fusion algorithms including the VANet model. The model selects eight metrics from different aspects to build a fusion quality evaluation system to complete the performance evaluation of the fused images. Friedman's test and the post-hoc Nemenyi test are introduced to conduct professional statistical tests to demonstrate the superiority of VANet model.

Conclusions: The VANet model completely captures and fuses the texture details and color information of the source images. From the fusion results, the metabolism and structural information of the model are well expressed and there is no interference of color information on the structure and texture; in terms of the objective evaluation system, the metric value of the VANet model is generally higher than that of other methods.; in terms of efficiency, the time consumption of the model is acceptable; in terms of scalability, the model is not affected by the input order of source images and can be extended to tri-modal fusion.

Keywords: Attention mechanism; Contextual information; Medical image; Medical image fusion; Multi scale feature extraction.

MeSH terms

  • Algorithms
  • Databases, Factual
  • Image Processing, Computer-Assisted* / methods
  • Magnetic Resonance Imaging* / methods