Upregulated TUBG1 expression is correlated with poor prognosis in hepatocellular carcinoma

PeerJ. 2022 Dec 5:10:e14415. doi: 10.7717/peerj.14415. eCollection 2022.

Abstract

Background: Hepatocellular carcinoma (HCC) development is a complex pathological process. Tubulin gamma 1 (TUBG1) plays an oncogenic role in several human cancers; however, its functional role in HCC tumorigenesis remains unknown.

Methods: Herein we first evaluated the gene expression levels of TUBG1 in HCC using data from The Cancer Genome Atlas and Gene Expression Profiling Interactive Analysis databases. We then elucidated the association between TUBG1 gene expression levels and survival rates of patients with HCC. Cell cycle, proliferation, transwell migration, and matrigel invasion assays were used to study the effects of TUBG1 on the malignant phenotypes of HCC cells.

Results: Based on the data obtained from the aforementioned databases and our in vitro experiments, TUBG1 was found to be overexpressed in HCC and patients with high TUBG1 expression levels showed a remarkably poor overall survival rate. In addition, the expression of TUBG1 significantly promoted the malignant phenotypes of HCC cells in vitro. Gene ontology term enrichment analysis revealed that co-regulated genes were enriched in biological processes mainly involved in chromosome segregation, chromosomal region, and chromatin binding; moreover, Kyoto Encyclopedia of Genes and Genome pathway analysis showed that they were mainly involved in cell cycle, oocyte meiosis, platinum drug resistance, and the p53 signaling pathway.

Conclusions: We report that TUBG1 is an important oncogene in HCC. It promotes HCC progression and may serve as a potential prognostic biomarker for HCC. Future studies are warranted to unveil molecular biological mechanisms underlying TUBG1 carcinogenesis.

Keywords: Carcinogenesis; Diagnostic biomarker; Hepatocellular carcinoma; Overall survival; Ubulin gamma 1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carcinoma, Hepatocellular* / genetics
  • Gene Expression Profiling
  • Humans
  • Liver Neoplasms* / genetics
  • Prognosis
  • Tubulin / genetics

Substances

  • Tubulin
  • TUBG1 protein, human

Associated data

  • figshare/10.6084/m9.figshare.20346897

Grants and funding

This work was supported by the Natural Science Foundation of Xinjiang Uygur Autonomous Region (2018D01C195). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.