A variant rs6214 within IGF-1 confers risk for ulcerative colitis in Chinese Han populations

Funct Integr Genomics. 2022 Dec 15;23(1):1. doi: 10.1007/s10142-022-00921-0.

Abstract

Insulin growth factor-1 (IGF-1) has been found to correlate with various diseases such as cancer and cardiovascular diseases including ulcerative colitis (UC). The present study aimed to investigate the plausible association of rs6214 (C > T) within IGF-1 and UC susceptibility in Chinese Han populations. A total of 977 UC patients and 1029 healthy controls were enrolled, and rs6214 was genotyped with PCR and direct sequencing on the ABI 3730XL DNA analyzer platform. Logistic regression analysis was applied for the correlation of rs6214 and UC susceptibility via calculation of odds ratio (OR) with a 95% confidence interval (95% CI) adjusted for age and sex under different genetic models. The difference of clinical parameters between genotypes was measured by one-way analysis of variance (ANOVA). Additional functional assays were conducted to establish the probable relationship. The results indicated that the T allele of rs6214 showed roughly 37% greater risk for UC risk in the additive model (OR = 1.37, 95% CI = 1.21-1.55, P < 0.000001) when compared with C allele carriers, and the pattern was similar in other three genetic models. Further stratified analysis suggested that the association was particularly noteworthy in UC patients with extensive colitis and severe condition. Moreover, the blood level of IGF-1 was downregulated in UC patients, and the mRNA level was lower in T allele carriers in rectal tissues of UC cases. Additional luciferase assay demonstrated that rs6214 regulates IGF-1 expression via promoting miR-2053. Collectively, rs6214 increased UC susceptibility and suppresses IGF-1 expression by enhancing miR-2053 binding. The current findings provided evidence that rs6214 is a promising biomarker for UC prediction and prognosis.

Keywords: 3′UTR; Insulin growth factor-1; Susceptibility; Ulcerative colitis; miR-2053; rs6214.

MeSH terms

  • Case-Control Studies
  • Colitis, Ulcerative* / genetics
  • East Asian People / genetics
  • Fibrinogen / genetics
  • Gene Frequency
  • Genetic Predisposition to Disease / genetics
  • Genotype
  • Humans
  • Insulin / genetics
  • Insulin-Like Growth Factor I* / genetics
  • MicroRNAs
  • Polymorphism, Single Nucleotide
  • Risk

Substances

  • Fibrinogen
  • Insulin
  • Insulin-Like Growth Factor I
  • MicroRNAs
  • IGF1 protein, human
  • MIRN2053 microRNA, human