Simultaneous solving high-resolution structures of various enzymes from human kidney microsomes

Life Sci Alliance. 2022 Nov 30;6(2):e202201580. doi: 10.26508/lsa.202201580. Print 2023 Feb.

Abstract

The ability to investigate tissues and organs through an integrated systems biology approach has been thought to be unobtainable in the field of structural biology, where the techniques mainly focus on a particular biomacromolecule of interest. Here we report the use of cryo-electron microscopy (cryo-EM) to define the composition of a raw human kidney microsomal lysate. We simultaneously identify and solve cryo-EM structures of four distinct kidney enzymes whose functions have been linked to protein biosynthesis and quality control, biosynthesis of retinoic acid, gluconeogenesis and glycolysis, and the regulation and metabolism of amino acids. Interestingly, all four of these enzymes are directly linked to cellular processes that, when disrupted, can contribute to the onset and progression of diabetes. This work underscores the potential of cryo-EM to facilitate tissue and organ proteomics at the atomic level.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acids
  • Cryoelectron Microscopy
  • Glycolysis
  • Humans
  • Kidney*
  • Microsomes*

Substances

  • Amino Acids

Associated data

  • PDB/5F0E
  • PDB/8D43
  • PDB/8D46
  • PDB/8D44
  • PDB/8D45