DPBET: A dual-path lung nodules segmentation model based on boundary enhancement and hybrid transformer

Comput Biol Med. 2022 Dec;151(Pt B):106330. doi: 10.1016/j.compbiomed.2022.106330. Epub 2022 Nov 20.

Abstract

Accurate segmentation of lung nodules is an important basis for the subsequent differentiation of benign and malignant pathological types, which is conducive to early detection of lung cancer. Due to the local feature extraction characteristics of convolution and the limited receptive field of continuous down-sampling, the existing deep convolutional neural networks (CNN) for lung nodules segmentation cause the loss of information of lesion boundaries and locations. To address this issue, a dual-path lung nodules segmentation model based on boundary enhancement and hybrid transformer (DPBET) is proposed in this paper. The model consists of a global path, an edge path, and a feature aggregation module. In the global path, a de-redundant transformer module with explicit guidance is proposed, called Cascade-Axial-Prune Transformer (CAP-Trans). It is combined with CNN to form a hybrid architecture to generate a global representation of the target lesion. In the edge path, an edge detection operator is introduced to construct a lung nodule edge enhancement dataset, which improves the dataset utilization while providing more prior knowledge of the target lesion boundar. In addition, the Down-Attention Sample (DASample) as a basic encoding block is designed to effectively perceive local features of different ranges and scales in the down-sampling process of lung nodule feature extraction. Finally, a feature aggregation module is designed to fuse the outputs of the two paths to get the final segmentation result. Our DPBET can delineate the boundaries of various types of pulmonary nodules, with an average DSC of 89.86% and an average Sensitivity of 90.50% on the public dataset LIDC-IDRI. Compared with the state-of-the-art approaches, a substantial improvement has been achieved. The experimental results demonstrate that DPBET can use edge enhancement to promote the global-edge consistency relationship, and the network architecture is effective in lung nodule segmentation.

Keywords: Boundary enhancement; Convolutional neural networks; Dual-path; Lung nodules segmentation; Transformer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Humans
  • Lung
  • Lung Neoplasms* / diagnosis
  • Neural Networks, Computer
  • Tomography, X-Ray Computed* / methods