Identification of GLS as a cuproptosis-related diagnosis gene in acute myocardial infarction

Zheng Liu; Lei Wang; Qichang Xing; Xiang Liu; Yixiang Hu; Wencan Li; Qingzi Yan; Renzhu Liu; Nan Huang

doi:10.3389/fcvm.2022.1016081

Identification of GLS as a cuproptosis-related diagnosis gene in acute myocardial infarction

Front Cardiovasc Med. 2022 Nov 11:9:1016081. doi: 10.3389/fcvm.2022.1016081. eCollection 2022.

Authors

Zheng Liu^{1

2}, Lei Wang³, Qichang Xing^{1

2}, Xiang Liu^{1

2}, Yixiang Hu^{1

2}, Wencan Li^{1

2}, Qingzi Yan^{1

2}, Renzhu Liu^{1

2}, Nan Huang¹

Affiliations

¹ Clinical Pharmacy, Xiangtan Center Hospital, Xiangtan, China.
² Zhou Honghao Research Institute Xiangtan, Xiangtan, China.
³ Department of Cardiovascular Medicine, Xiangtan Center Hospital, Xiangtan, China.

Abstract

Acute myocardial infarction (AMI) has the characteristics of sudden onset, rapid progression, poor prognosis, and so on. Therefore, it is urgent to identify diagnostic and prognostic biomarkers for it. Cuproptosis is a new form of mitochondrial respiratory-dependent cell death. However, studies are limited on the clinical significance of cuproptosis-related genes (CRGs) in AMI. In this study, we systematically assessed the genetic alterations of CRGs in AMI by bioinformatics approach. The results showed that six CRGs (LIAS, LIPT1, DLAT, PDHB, MTF1, and GLS) were markedly differentially expressed between stable coronary heart disease (stable_CAD) and AMI. Correlation analysis indicated that CRGs were closely correlated with N6-methyladenosine (m6A)-related genes through R language "corrplot" package, especially GLS was positively correlated with FMR1 and MTF1 was negatively correlated with HNRNPA2B1. Immune landscape analysis results revealed that CRGs were closely related to various immune cells, especially GLS was positively correlated with T cells CD4 memory resting and negatively correlated with monocytes. Kaplan-Meier analysis demonstrated that the group with high DLAT expression had a better prognosis. The area under curve (AUC) certified that GLS had good diagnostic value, in the training set (AUC = 0.87) and verification set (ACU = 0.99). Gene set enrichment analysis (GSEA) suggested that GLS was associated with immune- and hypoxia-related pathways. In addition, Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, competing endogenous RNA (ceRNA) analysis, transcription factor (TF), and compound prediction were performed to reveal the regulatory mechanism of CRGs in AMI. Overall, our study can provide additional information for understanding the role of CRGs in AMI, which may provide new insights into the identification of therapeutic targets for AMI.

Keywords: GLS; GSEA; acute myocardial infarction; cuproptosis-related genes; immune landscape analysis.