Targeted Panel Sequencing Identifies an Intronic c.5225-3C>G Variant of the FBN1 Gene Causing Sporadic Marfan Syndrome with Annuloaortic Ectasia

Genes (Basel). 2022 Nov 13;13(11):2108. doi: 10.3390/genes13112108.

Abstract

Marfan syndrome (MFS) is a hereditary connective tissue disease whose clinical severity varies widely. Mutations of the FBN1 gene encoding fibrillin-1 are the most common genetic cause of Marfanoid habitus; however, about 10% of MFS patients are unaware of their genetic defects. Herein, we report a Korean patient with MFS and annuloaortic ectasia caused by an intronic c.5225-3C>G variant of the FBN1 gene identified by targeted panel sequencing. The reverse transcription analysis of FBN1 revealed that the intron 43 sequence from positions c.5297-1516 to c.5297-1 was retained at the coding sequence as a consequence of the c.5225-3C>G variant enhancing a cryptic splice acceptor site (c.5297-1518_5297-1517AG) in intron 43. The retained sequence of the part of intron 43 caused the same effect as insertion mutation (NM_000138.5:c.5297_c.5298ins5297-1516_5297-1), resulting in a frameshift mutation resulting in p.Ile1767Trpfs*3. The patient underwent an urgent modified Bentall operation with a 29 mm mechanical valve for annuloaortic ectasia and severe aortic valve regurgitation. This report emphasizes the need for functional investigations into the diagnostic workflows of certain diseases or gene panels with suspected high rates of intronic variants and potential pathogenic effects. Hence, further descriptions of individuals with intronic variants causing alternative splicing expected to have pathogenic effects at different transcript levels are crucial for improving our understanding.

Keywords: FBN1 gene; Marfan syndrome; annuloaortic ectasia; aortic valve regurgitation; c.5225-3C>G; intronic variant; targeted panel sequencing.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aortic Aneurysm, Thoracic* / etiology
  • Fibrillin-1* / genetics
  • Humans
  • Introns
  • Marfan Syndrome* / complications
  • Marfan Syndrome* / genetics
  • Microfilament Proteins / genetics
  • Mutation
  • RNA Splice Sites

Substances

  • FBN1 protein, human
  • Fibrillin-1
  • Microfilament Proteins
  • RNA Splice Sites

Supplementary concepts

  • Aortic Aneurysm, Familial Thoracic 1

Grants and funding

This work was supported by the National Research Foundation of Korea (NRF) grants funded by the Korean government (MSIT; Ministry of Science and ICT) (No. 2022R1G1A1013497).