Quantifying F-actin patches in single melanoma cells using total-internal reflection fluorescence microscopy

Sci Rep. 2022 Nov 21;12(1):19993. doi: 10.1038/s41598-022-22632-z.

Abstract

Total-internal reflection fluorescence (TIRF) microscope is a unique technique for selective excitation of only those fluorophore molecules in a cellular environment, which are located at the sub-diffraction axial distance of a cell's contact-area. Despite this prominent feature of the TIRF microscope, making quantitative use of this technique has been a challenge, since the excitation intensity strongly depends on the axial position of a fluorophore molecule. Here, we present an easy-implemented data analysis method to quantitatively characterize the fluorescent signal, without considering the intensity-value. We use F-actin patches in single-melanoma cells as an example and define two quantities of elongation and surface density for F-actin patches at the contact-area of a melanoma cell. The elongation parameter can evaluate the dispersion of F-actin patches at the contact-area of a cell and is useful to classify the attaching, spreading, and expanding stages of a cell. Following that, we present the profile of the surface density of F-actin patches as a quantity to probe the spatio-temporal distribution of the F-actin patches at the contact-area of a cell. The data analysis methods that are proposed here will also be applicable in the image analysis of the other advanced optical microscopic methods.

MeSH terms

  • Actin Cytoskeleton / metabolism
  • Actins* / metabolism
  • Fluorescent Dyes
  • Humans
  • Image Processing, Computer-Assisted / methods
  • Melanoma*
  • Microscopy, Fluorescence / methods

Substances

  • Actins
  • Fluorescent Dyes