Accuracy of Xpert® MTB/RIF Ultra test for posterior oropharyngeal saliva for the diagnosis of paucibacillary pulmonary tuberculosis: a prospective multicenter study

Emerg Microbes Infect. 2023 Dec;12(1):2148564. doi: 10.1080/22221751.2022.2148564.

Abstract

Background: Posterior oropharyngeal saliva (POS) is increasingly recognized as an alternative specimen for detecting respiratory pathogens. The accuracy of Xpert® MTB/RIF Ultra (X-Ultra), when performed on POS obtained from patients with paucibacillary pulmonary tuberculosis (TB) is unclear.

Methods: We consecutively recruited adults with symptoms suggestive of pulmonary TB who were negative by both smear microscopy and Xpert MTB/RIF (X-Classic). Each participant was required to provide one bronchoalveolar lavage fluid (BALF) and one POS specimen, respectively. Diagnostic performances of X-Ultra and X-Classic on POS were compared against clinical and mycobacterial reference standards.

Findings: 686 participants meeting inclusion criteria were consecutively enrolled into the study. The overall diagnostic sensitivities of X-Ultra and X-Classic on POS samples were 78.9% [95% confidence interval (CI): 72.8-83.8] and 56.4% (95% CI: 49.7-62.9), respectively; the specificities were 96.6% (95% CI: 94.3-98.1) for X-Ultra and 97.6 (95CI: 95.5-98.8) for X-Classic in POS specimens. Notably, the sensitivity of X-Ultra on POS was as sensitive as X-Classic on BALF against microbiological reference standard (78.9% VS 73.1%). Against clinical diagnosis as a reference standard, the sensitivities of X-Ultra and X-Classic on POS were 55.9% (95% CI: 50.5-61.2; 193/345) and 40.0% (95% CI: 34.8-45.4; 138/345), respectively. The risk of negative results with POS was dramatically increased with decreasing bacterial loads.

Conclusions: The testing of POS using X-Ultra shows promise as a tool to identify patients with paucibacillary TB. Considering that bronchoscopy is a semi-invasive procedure, POS testing ahead of bronchoscopy, may decrease the need for bronchoscopic procedures, and the cost of care.

Keywords: MTB/RIF Ultra; Tuberculosis; accuracy; diagnosis; posterior oropharyngeal saliva.

Publication types

  • Multicenter Study

MeSH terms

  • Adult
  • Antibiotics, Antitubercular* / therapeutic use
  • Humans
  • Mycobacterium tuberculosis* / genetics
  • Prospective Studies
  • Rifampin
  • Sensitivity and Specificity
  • Tuberculosis, Pulmonary* / diagnosis
  • Tuberculosis, Pulmonary* / microbiology

Substances

  • Antibiotics, Antitubercular
  • Rifampin

Grants and funding

This study was funded in part by the Capital’s Funds for Health Improvement and Research [grant number 2022-2-1041], the Gusu Health Talents Project [grant number GSWS2020092] and the Cepheid Investigator-Initiated Study award [grant number Cepheid-IIS-2020-0025]. This study was also supported by Beijing Hospital Authority.