Transcriptome Analysis of Human Glioblastoma Cells Susceptible to Infection with the Leningrad-16 Vaccine Strain of Measles Virus

Viruses. 2022 Nov 2;14(11):2433. doi: 10.3390/v14112433.

Abstract

Glioblastoma multiforme (GBM) accounts for almost half of all primary malignant brain tumors in adults and has a poor prognosis. Here we demonstrated the oncolytic potential of the L-16 vaccine strain of measles virus (MV) against primary human GBM cells and characterized the genetic patterns that determine the sensitivity of primary human GBM cells to oncolytic therapy. MV replicated in all GBM cells, and seven out of eight cell lines underwent complete or partial oncolysis. RNA-Seq analysis identified about 1200 differentially expressed genes (FDR < 0.05) with at least two-fold expression level change between MV-infected and uninfected cells. Among them, the most significant upregulation was observed for interferon response, apoptosis and cytokine signaling. One out of eight GBM cell lines was defective in type I interferon production and, thus, in the post-interferon response, other cells lacked expression of different cellular defense factors. Thus, none of the cell lines displayed induction of the total gene set necessary for effective inhibition of MV replication. In the resistant cells, we detected aberrant expression of metalloproteinase genes, particularly MMP3. Thus, such genes could be considered intriguing candidates for further study of factors responsible for cell sensitivity and resistance to L-16 MV infection.

Keywords: cancer immunotherapy; glioblastoma multiforme; measles virus; oncolytic viruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • Gene Expression Profiling
  • Glioblastoma* / genetics
  • Glioblastoma* / therapy
  • Humans
  • Interferons / genetics
  • Measles Vaccine
  • Measles virus / physiology
  • Measles*
  • Oncolytic Virotherapy*
  • Oncolytic Viruses* / physiology
  • Vaccines*
  • Xenograft Model Antitumor Assays

Substances

  • Interferons
  • Vaccines
  • Measles Vaccine

Grants and funding

This work was financially supported by the Russian Science Foundation (project no. 22-15-00304). The experimental study was carried out on the scientific equipment from the Centers of Collective Use Center “I.I. Mechnikov NIIVS” and EIMB RAS “Genome” Moscow, Russia.