Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10

Genes (Basel). 2022 Oct 30;13(11):1984. doi: 10.3390/genes13111984.

Abstract

The present study demonstrates the biocontrol potential of a plant growth-promoting bacterial strain using three different approaches: (i) an in vitro evaluation of antagonistic activity against important phytopathogenic fungi; (ii) an evaluation under greenhouse conditions with strawberry plants to assess the control of gray mold; and (iii) an in silico whole genome sequence mining to assign genetic features such as gene clusters or isolated genes to the strain activity. The in vitro assay showed that the B.BV10 strain presented antagonistic activity, inhibiting the mycelial growth in all the phytopathogenic fungi evaluated. The application of the Bacillus velezensis strain B.BV10 under greenhouse conditions reduced the presence of Botrytis cinerea and increased the mean fruit biomass. The genome of B.BV10 was estimated at 3,917,533 bp, with a GC content of 46.6% and 4088 coding DNA sequences, and was identified as B. velezensis. Biosynthetic gene clusters related to the synthesis of the molecules with antifungal activity were found in its genome. Genes related to the regulation/formation of biofilms, motility, and the important properties for the rhizospheric colonization were also found in the genome. The current study offers a comprehensive understanding of the genomic architecture and control activity of phytopathogenic fungi by the B. velezensis strain B.BV10 that may substantiate the industrialization of this strain in the future.

Keywords: B. velezensis; biocontrol; biosynthetic pathways; plant growth-promoting bacteria.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antifungal Agents / pharmacology
  • Bacillus* / genetics
  • Biological Control Agents*
  • Fungi

Substances

  • Biological Control Agents
  • Antifungal Agents

Supplementary concepts

  • Bacillus velezensis

Grants and funding

Part of this study was supported by the company Simbiose-Agro, Brazil, providing payment of inputs (Project No. 433-765 FAUEL/UEL). A.G. de Oliveira was supported by a research fellowship from CNPq, Grant No. 305899/2021-0. Residual expenses were borne by intramural budgets from the State University of Londrina, Parana, Brazil and Brazilian funding agencies (Coordination of Superior Level Staff Improvement—CAPES, Financier of Studies and Projects—FINEP and Araucaria Foundation—FA).