Partial Disturbance of Microprocessor Function in Human Stem Cells Carrying a Heterozygous Mutation in the DGCR8 Gene

Genes (Basel). 2022 Oct 23;13(11):1925. doi: 10.3390/genes13111925.

Abstract

Maturation of microRNAs (miRNAs) begins by the "Microprocessor" complex, containing the Drosha endonuclease and its partner protein, "DiGeorge Syndrome Critical Region 8" (DGCR8). Although the main function of the two proteins is to coordinate the first step of precursor miRNAs formation, several studies revealed their miRNA-independent functions in other RNA-related pathways (e.g., in snoRNA decay) or, for the DGCR8, the role in tissue development. To investigate the specific roles of DGCR8 in various cellular pathways, we previously established a human embryonic stem-cell (hESC) line carrying a monoallelic DGCR8 mutation by using the CRISPR-Cas9 system. In this study, we genetically characterized single-cell originated progenies of the cell line and showed that DGCR8 heterozygous mutation results in only a modest effect on the mRNA level but a significant decrease at the protein level. Self-renewal and trilineage differentiation capacity of these hESCs were not affected by the mutation. However, partial disturbance of the Microprocessor function could be revealed in pri-miRNA processing along the human chromosome 19 miRNA cluster in several clones. With all these studies, we can demonstrate that the mutant hESC line is a good model to study not only miRNA-related but also other "noncanonical" functions of the DGCR8 protein.

Keywords: C19MC; differentiation; human pluripotent stem cells; miRNA cluster; miRNA processing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Humans
  • MicroRNAs* / genetics
  • MicroRNAs* / metabolism
  • Mutation
  • RNA Processing, Post-Transcriptional
  • RNA-Binding Proteins* / genetics
  • RNA-Binding Proteins* / metabolism
  • Stem Cells / metabolism

Substances

  • RNA-Binding Proteins
  • MicroRNAs
  • DGCR8 protein, human

Grants and funding

This research was funded by the National Brain Research Program (NAP) of Hungary (grant numbers: 2017-1.2.1-NKP-2017-00002 to Á.A.), the National Research, Development and Innovation Office (OTKA-K128369 to Á.A. and “HunProtExc” 2018-1.2.1-NKP-2018-00005 to T.I.O.), and the Hungarian Academy of Sciences (PC-II-12/2022 to T.I.O.). The authors acknowledge the financial support received as a Centre of Excellence of the Hungarian Academy of Sciences.