Screening, Expression, and Identification of Nanobody against SARS-CoV-2 Spike Protein

Cells. 2022 Oct 24;11(21):3355. doi: 10.3390/cells11213355.

Abstract

Coronavirus disease 2019 (COVID-19) is caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), an infectious disease that has become a serious burden on global public health. This study screened and yielded specific nanobodies (Nbs) against SARS-CoV-2 spike protein receptor binding domain (RBD), following testing its basic characteristics. A nanobody phage library was established by immunizing a camel with RBD protein. After three rounds of panning, the positive colonies were screened by enzyme-linked immunosorbent assay (ELISA). By sequencing, four different sequences of nanobody gene fragments were selected. The four nanobody fusion proteins were expressed and purified, respectively. The specificity and affinity of the four nanobodies were identified by ELISA. Our results showed that an immune phage display library against SARS-CoV-2 has been successfully constructed with a library capacity of which was 4.7 × 108 CFU. The four purified nanobodies showed specific high-affinity binding SARS-CoV-2 S-RBD. Among these, the antigen binding affinity of Nb61 was more comparable to that of commercial rabbit anti-SARS-CoV-2 S-RBD antibodies. In sum, our study has obtained four nanobody strains against SARS-CoV-2 S-RBD with significant affinity and specificity, therefore laying an essential foundation for further research as well as the applications of diagnostic and therapeutic tools of SARS-CoV-2.

Keywords: SARS-CoV-2; nanobody; phage display; single-domain antibody; spike protein.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antibodies, Neutralizing
  • COVID-19*
  • Camelus
  • Humans
  • Rabbits
  • SARS-CoV-2
  • Single-Domain Antibodies*
  • Spike Glycoprotein, Coronavirus / chemistry

Substances

  • spike protein, SARS-CoV-2
  • Spike Glycoprotein, Coronavirus
  • Single-Domain Antibodies
  • Antibodies, Neutralizing

Grants and funding

This research was funded by grants from the Project of National Key Research and Development Plan “National Key R&D Program of China” (No. 2019YFE0117300); and the Guangxi Science and Technology Base and Talents Special Project (No. GuiKe-AA20325001); and the International (Regional) Cooperation and Exchange Program of National Natural Science Foundation of China (No. 82220108003).