We present a method to transport Bose-Einstein condensates (BECs) in anharmonic traps and in the presence of atom-atom interactions in short times without residual excitation. Using a combination of a variational approach and inverse engineering methods, we derive a set of Ermakov-like equations that take into account the coupling between the centre of mass motion and the breathing mode. By an appropriate inverse engineering strategy of those equations, we then design the trap trajectory to achieve the desired boundary conditions. Numerical examples for cubic or quartic anharmonicities are provided for fast and high-fidelity transport of BECs. Potential applications are atom interferometry and quantum information processing. This article is part of the theme issue 'Shortcuts to adiabaticity: theoretical, experimental and interdisciplinary perspectives'.
Keywords: Bose–Einstein condensates; atomic transport; quantum control; shortcuts to adiabaticity.