Impact of Peptide Sequences on Their Structure and Function: Mimicking of Virus-Like Nanoparticles for Nucleic Acid Delivery

Chembiochem. 2023 Jan 3;24(1):e202200519. doi: 10.1002/cbic.202200519. Epub 2022 Nov 24.

Abstract

We rationally designed a series of amphiphilic hepta-peptides enriched with a chemically conjugated guanidiniocarbonylpyrrole (GCP) unit at the lysine side chain. All peptides are composed of polar (GCP) and non-polar (cyclohexyl alanine) residues but differ in their sequence periodicity, resulting in different secondary as well as supramolecular structures. CD spectra revealed the assembly of β-sheet-, α-helical and random structures for peptides 1, 2 and 3, respectively. Consequently, this enabled the formation of distinct supramolecular assemblies such as fibres, nanorod-like or spherical aggregates. Notably, all three cationic peptides are equipped with the anion-binding GCP unit and thus possess a nucleic acid-binding centre. However, only the helical (2) and the unstructured (3) peptide were able to assemble into small virus-like DNA-polyplexes and effectively deliver DNA into cells. Notably, as both peptides (2 and 3) were also capable of siRNA-delivery, they could be utilized to downregulate expression of the caner-relevant protein Survivin.

Keywords: DNA-binding-compaction; nanoparticle gene delivery; non-covalent interactions; secondary structures; self-assembled nanostructures.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA
  • Nanoparticles*
  • Nucleic Acids*
  • Peptides / chemistry
  • Protein Structure, Secondary

Substances

  • Nucleic Acids
  • Peptides
  • DNA