Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome

Biomolecules. 2022 Sep 20;12(10):1329. doi: 10.3390/biom12101329.

Abstract

A cytochrome c552 mutant from Thermus thermophilus HB8 (rC552 C14A) was reported, where the polypeptide with replaced Cys14 by alanine, overexpressed in the cytosol of E. coli. The apo-form of the C14A mutant (apo-C14A) without the original prosthetic group was obtained by simple chemical treatments that retained compact conformation amenable to reconstitution with heme b and zinc(II)-protoporphyrin(IX), gradually followed by spontaneous formation of a covalent bond between the polypeptide and porphyrin ring in the reconstituted apo-C14A. Further analysis suggested that the residual Cys11 and vinyl group of the porphyrin ring linked through the thiol-ene reaction promoted by light under ambient conditions. In this study, we describe the kinetic improvement of the covalent bond formation in accordance with the mechanism of the photoinduced thiol-ene reaction, which involves a thiyl radical as a reaction intermediate. Adding a radical generator to the reconstituted C14A mutant with either heme-b or zinc(II) porphyrin accelerated the bond-forming reaction, which supported the involvement of a radical species in the reaction. Partial observation of the reconstituted C14A in a dimer form and detection of sulfuryl radical by EPR spectroscopy indicated a thiyl radical on Cys11, a unique cysteinyl residue in rC552 C14A. The covalent bond forming mediated by the radical generator was also adaptable to the reconstituted apo-C14A with manganese(II)-protoporphyrin(IX), which also exhibits light-mediated covalent linkage formation. Therefore, the radical generator extends the versatility of producing c-type-like cytochrome starting from a metallo-protoporphyrin(IX) and the apo-C14A instantaneously.

Keywords: Mn-protoporphyrin(IX); Zn-protoporphyrin(IX); c-type protein; cytochrome c552; sulfuryl radical; thermally tolerance cytochrome; thiol-ene reaction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alanine
  • Cytochromes c / genetics
  • Escherichia coli* / genetics
  • Heme / chemistry
  • Manganese
  • Protoporphyrins* / chemistry
  • Sulfhydryl Compounds
  • Zinc

Substances

  • Protoporphyrins
  • Manganese
  • Heme
  • Cytochromes c
  • Sulfhydryl Compounds
  • Alanine
  • Zinc

Grants and funding

This research was funded by Deputyship for Research & Innovation, Ministry of Education in Saudi Arabia, grant numbers (149/442).