An Alzheimer's Disease Patient-Derived Olfactory Stem Cell Model Identifies Gene Expression Changes Associated with Cognition

Cells. 2022 Oct 17;11(20):3258. doi: 10.3390/cells11203258.

Abstract

An early symptom of Alzheimer's disease (AD) is an impaired sense of smell, for which the molecular basis remains elusive. Here, we generated human olfactory neurosphere-derived (ONS) cells from people with AD and mild cognitive impairment (MCI), and performed global RNA sequencing to determine gene expression changes. ONS cells expressed markers of neuroglial differentiation, providing a unique cellular model to explore changes of early AD-associated pathways. Our transcriptomics data from ONS cells revealed differentially expressed genes (DEGs) associated with cognitive processes in AD cells compared to MCI, or matched healthy controls (HC). A-Kinase Anchoring Protein 6 (AKAP6) was the most significantly altered gene in AD compared to both MCI and HC, and has been linked to cognitive function. The greatest change in gene expression of all DEGs occurred between AD and MCI. Gene pathway analysis revealed defects in multiple cellular processes with aging, intellectual deficiency and alternative splicing being the most significantly dysregulated in AD ONS cells. Our results demonstrate that ONS cells can provide a cellular model for AD that recapitulates disease-associated differences. We have revealed potential novel genes, including AKAP6 that may have a role in AD, particularly MCI to AD transition, and should be further examined.

Keywords: AKAP6; Alzheimer’s disease; RNA Sequencing; aging; cognition; mild cognitive impairment; olfactory neurosphere-derived cells; patient-derived olfactory mucosa.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • A Kinase Anchor Proteins / genetics
  • Alzheimer Disease* / genetics
  • Alzheimer Disease* / pathology
  • Cells, Cultured
  • Cognition*
  • Gene Expression*
  • Humans
  • Olfactory Mucosa* / metabolism
  • Olfactory Mucosa* / pathology
  • Stem Cells* / metabolism
  • Stem Cells* / pathology

Substances

  • A Kinase Anchor Proteins

Grants and funding

This research was funded by the National Health and Medical Research Council of Australia (NHMRC) (APP1125796). A.R.W. is supported by an NHMRC Senior Research Fellowship (APP1118452). L.M.R. is a recipient of the Queensland University of Technology Postgraduate Research Scholarship and QIMR Berghofer Medical Research Institute Top-Up Award.