Contribution of the 12-17 hydrophobic region of islet amyloid polypeptide in self-assembly and cytotoxicity

Mathilde Fortier; Mélanie Côté-Cyr; Vy Nguyen; Margaryta Babych; Phuong Trang Nguyen; Roger Gaudreault; Steve Bourgault

doi:10.3389/fmolb.2022.1017336

Contribution of the 12-17 hydrophobic region of islet amyloid polypeptide in self-assembly and cytotoxicity

Front Mol Biosci. 2022 Oct 3:9:1017336. doi: 10.3389/fmolb.2022.1017336. eCollection 2022.

Authors

Mathilde Fortier^{1

2}, Mélanie Côté-Cyr^{1

2}, Vy Nguyen^{1

2}, Margaryta Babych^{1

2}, Phuong Trang Nguyen^{1

2}, Roger Gaudreault^{1

3}, Steve Bourgault^{1

2}

Affiliations

¹ Department of Chemistry, Succursale Centre-Ville, Université du Québec à Montréal, Montreal, QC, Canada.
² Quebec Network for Research on Protein Function, Engineering and Applications, PROTEO, Montreal, QC, Canada.
³ Department of Physics, Université de Montréal, Succursale Centre-ville, Montreal, QC, Canada.

Abstract

The islet amyloid polypeptide (IAPP) is a 37-residue aggregation-prone peptide hormone whose deposition as insoluble fibrils in the islets of Langerhans is associated with type II diabetes. Therapeutic interventions targeting IAPP amyloidogenesis, which contributes to pancreatic β-cell degeneration, remain elusive owing to the lack of understanding of the self-assembly mechanisms and of the quaternary proteospecies mediating toxicity. While countless studies have investigated the contributions of the 20-29 amyloidogenic core in self-assembly, IAPP central region, i.e. positions 11 to 19, has been less studied, notwithstanding its potential key role in oligomerization. In this context, the present study aimed at investigating the physicochemical and conformational properties driving IAPP self-assembly and associated cytotoxicity. Computational tools and all-atom molecular dynamics simulation suggested that the hydrophobic 12-17 segment promotes IAPP self-recognition and aggregation. Alanine scanning revealed that the hydrophobic side chains of Leu12, Phe15 and Val17 are critical for amyloid fibril formation. Destabilization of the α-helical folding by Pro substitution enhanced self-assembly when the pyrrolidine ring was successively introduced at positions Ala13, Asn14 and Phe15, in comparison to respective Ala-substituted counterparts. Modulating the peptide backbone flexibility at position Leu16 through successive incorporation of Pro, Gly and α-methylalanine, inhibited amyloid formation and reduced cytotoxicity, while the isobutyl side chain of Leu16 was not critical for self-assembly and IAPP-mediated toxicity. These results highlight the importance of the 12-17 hydrophobic region of IAPP for self-recognition, ultimately supporting the development of therapeutic approaches to prevent oligomerization and/or fibrillization.

Keywords: amyloid fibrils; conformation; cytotoxicity; islet amyloid polypeptide; molecular dynamics simulation; peptide aggregation; secondary structure; self-assembly.