Fluorescent Dynamic Covalent Polymers for DNA Complexation and Templated Assembly

Molecules. 2022 Oct 6;27(19):6648. doi: 10.3390/molecules27196648.

Abstract

Dynamic covalent polymers (DCPs) offer opportunities as adaptive materials of particular interest for targeting, sensing and delivery of biological molecules. In this view, combining cationic units and fluorescent units along DCP chains is attractive for achieving optical probes for the recognition and delivery of nucleic acids. Here, we report on the design of acylhydrazone-based DCPs combining cationic arginine units with π-conjugated fluorescent moieties based on thiophene-ethynyl-fluorene cores. Two types of fluorescent building blocks bearing neutral or cationic side groups on the fluorene moiety are considered in order to assess the role of the number of cationic units on complexation with DNA. The (chir)optical properties of the building blocks, the DCPs, and their complexes with several types of DNA are explored, providing details on the formation of supramolecular complexes and on their stability in aqueous solutions. The DNA-templated formation of DCPs is demonstrated, which provides new perspectives on the assembly of fluorescent DCP based on the nucleic acid structure.

Keywords: DNA complexation; dynamic covalent polymers; fluorescence; templated assembly.

MeSH terms

  • Arginine
  • Cations / chemistry
  • DNA / chemistry
  • Fluorenes
  • Polymers* / chemistry
  • Smart Materials*
  • Thiophenes / chemistry

Substances

  • Cations
  • Fluorenes
  • Polymers
  • Smart Materials
  • Thiophenes
  • fluorene
  • DNA
  • Arginine

Grants and funding

The collaboration between Montpellier and Mons was supported through a joint PhD grant to C.K. Research in Mons was supported by the Wallonia Region and the Fund for Scientific Research (F.R.S.-FNRS) under the grants MIS No. F.4532.16 (SHERPA) and EOS No. 30650939 (PRECISION). Research at Montpellier is supported by CNRS and Université de Montpellier, the Région Languedoc-Roussillon (Research Grant “Chercheur(se)s d’Avenir–2015-005984) as well as the LabEx CheMISyst (ANR-10-LABX-05-01) and the FEDER Program (Fonds Européen de Développement Régional).