Identification of Metabolomics Biomarkers in Extracranial Carotid Artery Stenosis

Cells. 2022 Sep 27;11(19):3022. doi: 10.3390/cells11193022.

Abstract

The biochemical identification of carotid artery stenosis (CAS) is still a challenge. Hence, 349 male subjects (176 normal controls and 173 stroke patients with extracranial CAS ≥ 50% diameter stenosis) were recruited. Blood samples were collected 14 days after stroke onset with no acute illness. Carotid plaque score (≥2, ≥5 and ≥8) was used to define CAS severity. Serum metabolites were analyzed using a targeted Absolute IDQ®p180 kit. Results showed hypertension, diabetes, smoking, and alcohol consumption were more common, but levels of diastolic blood pressure, HDL-C, LDL-C, and cholesterol were lower in CAS patients than controls (p < 0.05), suggesting intensive medical treatment for CAS. PCA and PLS-DA did not demonstrate clear separation between controls and CAS patients. Decision tree and random forest showed that acylcarnitine species (C4, C14:1, C18), amino acids and biogenic amines (SDMA), and glycerophospholipids (PC aa C36:6, PC ae C34:3) contributed to the prediction of CAS. Metabolite panel analysis showed high specificity (0.923 ± 0.081, 0.906 ± 0.086 and 0.881 ± 0.109) but low sensitivity (0.230 ± 0.166, 0.240 ± 0.176 and 0.271 ± 0.169) in the detection of CAS (≥2, ≥5 and ≥8, respectively). The present study suggests that metabolomics profiles could help in differentiating between controls and CAS patients and in monitoring the progression of CAS.

Keywords: carotid artery stenosis; decision tree; ischemic stroke; metabolomics; random forest.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids
  • Biomarkers
  • Carotid Stenosis*
  • Cholesterol, LDL
  • Glycerophospholipids
  • Humans
  • Stroke*

Substances

  • Amino Acids
  • Biomarkers
  • Cholesterol, LDL
  • Glycerophospholipids

Grants and funding

This research was funded by Linkou Chang Gung Memorial Hospital, grant number CMRPG3E2131, CMRPG3F221, CMRPG3K2351. The APC was funded by Linkou Chang Gung Memorial Hospital. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.