Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy

PLoS One. 2022 Oct 13;17(10):e0275362. doi: 10.1371/journal.pone.0275362. eCollection 2022.

Abstract

Cholangiocarcinoma (CCA) is highly prevalent in the northeastern region of Thailand. Current diagnostic methods for CCA are often expensive, time-consuming, and require medical professionals. Thus, there is a need for a simple and low-cost CCA screening method. This work developed a rapid label-free technique by Raman spectroscopy combined with the multivariate statistical methods of principal component analysis and linear discriminant analysis (PCA-LDA), aiming to analyze and classify between CCA (n = 30) and healthy (n = 30) serum specimens. The model's classification performance was validated using k-fold cross validation (k = 5). Serum levels of cholesterol (548, 700 cm-1), tryptophan (878 cm-1), and amide III (1248,1265 cm-1) were found to be statistically significantly higher in the CCA patients, whereas serum beta-carotene (1158, 1524 cm-1) levels were significantly lower. The peak heights of these identified Raman marker bands were input into an LDA model, achieving a cross-validated diagnostic sensitivity and specificity of 71.33% and 90.00% in distinguishing the CCA from healthy specimens. The PCA-LDA technique provided a higher cross-validated sensitivity and specificity of 86.67% and 96.67%. To conclude, this work demonstrated the feasibility of using Raman spectroscopy combined with PCA-LDA as a helpful tool for cholangiocarcinoma serum-based screening.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amides
  • Bile Duct Neoplasms* / diagnosis
  • Bile Ducts, Intrahepatic
  • Cholangiocarcinoma* / diagnosis
  • Discriminant Analysis
  • Humans
  • Principal Component Analysis
  • Spectrum Analysis, Raman / methods
  • Tryptophan
  • beta Carotene

Substances

  • Amides
  • beta Carotene
  • Tryptophan

Grants and funding

This study was supported by external funding from the Thailand Research Fund’s Distinguished Research Professor Grant (OC, PMI, and WM; grant number DPG6280002) and by internal funding from the Research Fund of the Faculty of Engineering at Khon Kaen University under the Research Scholarship for M.Eng. Students project (OC, PS; contract number M-Eng.-BE-002/2564), Khon Kaen University Research and Graduate Studies (PMI and WM; Research Program), and Khon Kaen University Faculty of Medicine (WM, OC; grant number RG63301). The funders had no role in study design, data collection, interpretation, or the decision to submit the work for publication. There was no additional external funding received for this study.