Single-cell RNA sequencing analysis of shrimp immune cells identifies macrophage-like phagocytes

Elife. 2022 Oct 6:11:e80127. doi: 10.7554/eLife.80127.

Abstract

Despite the importance of innate immunity in invertebrates, the diversity and function of innate immune cells in invertebrates are largely unknown. Using single-cell RNA-seq, we identified prohemocytes, monocytic hemocytes, and granulocytes as the three major cell-types in the white shrimp hemolymph. Our results identified a novel macrophage-like subset called monocytic hemocytes 2 (MH2) defined by the expression of certain marker genes, including Nlrp3 and Casp1. This subtype of shrimp hemocytes is phagocytic and expresses markers that indicate some conservation with mammalian macrophages. Combined, our work resolves the heterogenicity of hemocytes in a very economically important aquatic species and identifies a novel innate immune cell subset that is likely a critical player in the immune responses of shrimp to threatening infectious diseases affecting this industry.

Keywords: Penaeus vannamei; differentiation; immunology; inflammation; invertebrate; macrophages; myeloid cell evolution; penaeus vannamei.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Arthropod Proteins* / genetics
  • Hemocytes
  • Immunity, Innate / genetics
  • Macrophages / metabolism
  • Mammals / genetics
  • NLR Family, Pyrin Domain-Containing 3 Protein / metabolism
  • Penaeidae* / genetics
  • Phagocytes / metabolism
  • Sequence Analysis, RNA

Substances

  • Arthropod Proteins
  • NLR Family, Pyrin Domain-Containing 3 Protein

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.