Avoiding the Misuse of Pathway Analysis Tools in Environmental Metabolomics

Cecilia Wieder; Jacob G Bundy; Clément Frainay; Nathalie Poupin; Pablo Rodríguez-Mier; Florence Vinson; Juliette Cooke; Rachel P J Lai; Fabien Jourdan; Timothy M D Ebbels

doi:10.1021/acs.est.2c05588

Avoiding the Misuse of Pathway Analysis Tools in Environmental Metabolomics

Environ Sci Technol. 2022 Oct 18;56(20):14219-14222. doi: 10.1021/acs.est.2c05588. Epub 2022 Sep 26.

Affiliations

¹ Department of Metabolism, Digestion and Reproduction, Faculty of Medicine, Imperial College London, Burlington Danes Building, Du Cane Road, London W12 0NN, U.K.
² Toxalim (Research Centre in Food Toxicology), Université de Toulouse, INRAE, ENVT, INP-Purpan, UPS, 180 chemin de Tournefeuille St-Martin-du-Touch, BP 3, 31931 Toulouse Cedex, France.
³ Department of Infectious Disease, Faculty of Medicine, Commonwealth Building, Imperial College London, Du Cane Road, London W12 0NN, U.K.
⁴ MetaToul-MetaboHUB, National Infrastructure of Metabolomics and Fluxomics, 180 chemin de Tournefeuille St-Martin-du-Touch, BP 3, 31931 Toulouse Cedex, France.

No abstract available

Keywords: enrichment analysis; environmental metabolomics; metabolic pathway; metabolomics; metabonomics; over-representation analysis; pathway analysis.

Avoiding the Misuse of Pathway Analysis Tools in Environmental Metabolomics

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