Protein engineering approach to enhance activity assays of mono-ADP-ribosyltransferases through proximity

Protein Eng Des Sel. 2022 Feb 17:35:gzac006. doi: 10.1093/protein/gzac006.

Abstract

Human mono-ADP-ribosylating PARP enzymes have been linked to several clinically relevant processes and many of these PARPs have been suggested as potential drug targets. Despite recent advances in the field, efforts to discover inhibitors have been hindered by the lack of tools to rapidly screen for high potency compounds and profile them against the different enzymes. We engineered mono-ART catalytic fragments to be incorporated into a cellulosome-based octavalent scaffold. Compared to the free enzymes, the scaffold-based system results in an improved activity for the tested PARPs due to improved solubility, stability and the proximity of the catalytic domains, altogether boosting their activity beyond 10-fold in the case of PARP12. This allows us to measure their activity using a homogeneous NAD+ conversion assay, facilitating its automation to lower the assay volume and costs. The approach will enable the discovery of more potent compounds due to increased assay sensitivity.

Keywords: ADP-ribosylation; PARP; cellulosome scaffold; drug discovery; enzyme assay; protein engineering.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ADP Ribose Transferases* / genetics
  • ADP Ribose Transferases* / metabolism
  • Catalysis
  • Humans
  • NAD
  • Poly(ADP-ribose) Polymerase Inhibitors* / pharmacology
  • Protein Engineering

Substances

  • Poly(ADP-ribose) Polymerase Inhibitors
  • NAD
  • ADP Ribose Transferases