Network pharmacology study of Yishen capsules in the treatment of diabetic nephropathy

PLoS One. 2022 Sep 12;17(9):e0273498. doi: 10.1371/journal.pone.0273498. eCollection 2022.

Abstract

Objective: In this study, we used network pharmacology to explore the possible therapeutic mechanism underlying the treatment of diabetic nephropathy with Yishen capsules.

Methods: The active chemical constituents of Yishen capsules were acquired using the Traditional Chinese Medicine Systems Pharmacology platform and the Encyclopedia of Traditional Chinese Medicine. Component target proteins were then searched and screened in the BATMAN database. Target proteins were cross-validated using the Comparative Toxicogenomics Database, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses of the target proteins were performed. Then, protein-protein interaction (PPI) analysis was performed using the STRING database. Finally, a pharmacological network was constructed to show the component-target-pathway relationships. Molecular docking was used to analyse the interaction between drug components and target proteins.

Results: In total, 285 active chemical components were found, including 85 intersection targets against DN. In the pharmacological network, 5 key herbs (A. membranaceus, A. sinensis, E. ferox, A. orientale, and R. rosea) and their corresponding 12 key components (beta-sitosterol, beta-carotene, stigmasterol, alisol B, mairin, quercetin, caffeic acid, 1-monolinolein, kaempferol, jaranol, formononetin, and calycosin) were screened. Furthermore, the 12 key components were related to 24 target protein nodes (e.g., AGT, AKT1, AKT2, BCL2, NFKB1, and SIRT1) and enriched in 24 pathway nodes (such as the NF-kappa B, AGE-RAGE, toll-like receptor, and relaxin signaling pathways). Molecular docking revealed that hydrogen bond was formed between drug components and target proteins.

Conclusion: In conclusion, the active constituents of Yishen capsules modulate targets or signaling pathways in DN pathogenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsules
  • Diabetes Mellitus*
  • Diabetic Nephropathies* / drug therapy
  • Drugs, Chinese Herbal
  • Humans
  • Molecular Docking Simulation
  • Network Pharmacology

Substances

  • Capsules
  • Drugs, Chinese Herbal
  • yishen

Grants and funding

This work was supported by the [Applied Basic Research Project (Natural Science Foundation Project) in Shanxi Province ] under Grant [number 201901D211485]. Include this sentence at the end of your statement: The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.